Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Signal Transduction (GO:0007165) Genes Targeted by hsa-mir-548k in AD Lung Beer Cluster 9 Table contains all genes in the AD Lung Beer cluster number 9. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548k GO:0007165 4299 AFF1 AF4/FMR2 family, member 1 [Source:HGNC Symbol;Acc:7135] zzz999 23175 LPIN1 lipin 1 [Source:HGNC Symbol;Acc:13345] zzz999 143 PARP4 poly (ADP-ribose) polymerase family, member 4 [Source:HGNC Symbol;Acc:271] T 1774 DNASE1L1 deoxyribonuclease I-like 1 [Source:HGNC Symbol;Acc:2957] zzz999 6776 STAT5A signal transducer and activator of transcription 5A [Source:HGNC Symbol;Acc:11366] P T Yes 9637 FEZ2 fasciculation and elongation protein zeta 2 (zygin II) [Source:HGNC Symbol;Acc:3660] T Yes 9459 ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:HGNC Symbol;Acc:685] T Yes 4208 MEF2C myocyte enhancer factor 2C [Source:HGNC Symbol;Acc:6996] P T Yes 3716 JAK1 Janus kinase 1 [Source:HGNC Symbol;Acc:6190] zzz999 Yes 4772 NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 [Source:HGNC Symbol;Acc:7775] zzz999 2644 GCHFR GTP cyclohydrolase I feedback regulator [Source:HGNC Symbol;Acc:4194] zzz999 23398 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:28954] zzz999 6376 CX3CL1 chemokine (C-X3-C motif) ligand 1 [Source:HGNC Symbol;Acc:10647] zzz999 Yes 9267 CYTH1 cytohesin 1 [Source:HGNC Symbol;Acc:9501] zzz999 Yes 10670 RRAGA Ras-related GTP binding A [Source:HGNC Symbol;Acc:16963] zzz999 Yes 24138 IFIT5 interferon-induced protein with tetratricopeptide repeats 5 [Source:HGNC Symbol;Acc:13328] T 6777 STAT5B signal transducer and activator of transcription 5B [Source:HGNC Symbol;Acc:11367] zzz999 Yes 6595 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:HGNC Symbol;Acc:11098] zzz999 678 ZFP36L2 zinc finger protein 36, C3H type-like 2 [Source:HGNC Symbol;Acc:1108] zzz999 23479 ISCU iron-sulfur cluster scaffold homolog (E. coli) [Source:HGNC Symbol;Acc:29882] zzz999 8233 ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:HGNC Symbol;Acc:23019] zzz999 805 CALM1 calmodulin 1 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1442] zzz999 397 ARHGDIB Rho GDP dissociation inhibitor (GDI) beta [Source:HGNC Symbol;Acc:679] zzz999 Yes 373 TRIM23 tripartite motif containing 23 [Source:HGNC Symbol;Acc:660] zzz999 Yes 91137 SLC25A46 solute carrier family 25, member 46 [Source:HGNC Symbol;Acc:25198] zzz999 6386 SDCBP syndecan binding protein (syntenin) [Source:HGNC Symbol;Acc:10662] T Yes 3660 IRF2 interferon regulatory factor 2 [Source:HGNC Symbol;Acc:6117] zzz999 Yes 9589 WTAP Wilms tumor 1 associated protein [Source:HGNC Symbol;Acc:16846] zzz999 841 CASP8 caspase 8, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1509] T Yes 10982 MAPRE2 microtubule-associated protein, RP/EB family, member 2 [Source:HGNC Symbol;Acc:6891] zzz999 Yes 2185 PTK2B PTK2B protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:9612] zzz999 Yes 989 SEPT7 septin 7 [Source:HGNC Symbol;Acc:1717] zzz999 1655 DDX5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:HGNC Symbol;Acc:2746] zzz999 324 APC adenomatous polyposis coli [Source:HGNC Symbol;Acc:583] zzz999 Yes 113 ADCY7 adenylate cyclase 7 [Source:HGNC Symbol;Acc:238] zzz999 Yes 9107 MTMR6 myotubularin related protein 6 [Source:HGNC Symbol;Acc:7453] T 5549 PRELP proline/arginine-rich end leucine-rich repeat protein [Source:HGNC Symbol;Acc:9357] zzz999 1519 CTSO cathepsin O [Source:HGNC Symbol;Acc:2542] zzz999 7082 TJP1 tight junction protein 1 (zona occludens 1) [Source:HGNC Symbol;Acc:11827] zzz999 10449 ACAA2 acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:83] zzz999 11118 BTN3A2 butyrophilin, subfamily 3, member A2 [Source:HGNC Symbol;Acc:1139] zzz999 7581 ZNF33A zinc finger protein 33A [Source:HGNC Symbol;Acc:13096] zzz999 8650 NUMB numb homolog (Drosophila) [Source:HGNC Symbol;Acc:8060] zzz999 54741 LEPROT leptin receptor overlapping transcript [Source:HGNC Symbol;Acc:29477] zzz999 7026 NR2F2 nuclear receptor subfamily 2, group F, member 2 [Source:HGNC Symbol;Acc:7976] P T Yes 10260 DENND4A DENN/MADD domain containing 4A [Source:HGNC Symbol;Acc:24321] zzz999 9802 DAZAP2 DAZ associated protein 2 [Source:HGNC Symbol;Acc:2684] zzz999 1915 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:3189] P T 4946 OAZ1 ornithine decarboxylase antizyme 1 [Source:HGNC Symbol;Acc:8095] T 3074 HEXB hexosaminidase B (beta polypeptide) [Source:HGNC Symbol;Acc:4879] zzz999 6430 SRSF5 serine/arginine-rich splicing factor 5 [Source:HGNC Symbol;Acc:10787] zzz999 6404 SELPLG selectin P ligand [Source:HGNC Symbol;Acc:10722] zzz999 90634 N4BP2L1 NEDD4 binding protein 2-like 1 [Source:HGNC Symbol;Acc:25037] T 351 APP amyloid beta (A4) precursor protein [Source:HGNC Symbol;Acc:620] T Yes 3021 H3F3B H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765] zzz999 2790 GNG10 guanine nucleotide binding protein (G protein), gamma 10 [Source:HGNC Symbol;Acc:4402] T Yes 834 CASP1 caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) [Source:HGNC Symbol;Acc:1499] zzz999 Yes 5583 PRKCH protein kinase C, eta [Source:HGNC Symbol;Acc:9403] zzz999 Yes 2012 EMP1 epithelial membrane protein 1 [Source:HGNC Symbol;Acc:3333] T 2745 GLRX glutaredoxin (thioltransferase) [Source:HGNC Symbol;Acc:4330] zzz999 5797 PTPRM protein tyrosine phosphatase, receptor type, M [Source:HGNC Symbol;Acc:9675] P T Yes 8798 DYRK4 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 [Source:HGNC Symbol;Acc:3095] zzz999 3588 IL10RB interleukin 10 receptor, beta [Source:HGNC Symbol;Acc:5965] T Yes 6744 SSFA2 sperm specific antigen 2 [Source:HGNC Symbol;Acc:11319] P T 2983 GUCY1B3 guanylate cyclase 1, soluble, beta 3 [Source:HGNC Symbol;Acc:4687] zzz999 Yes 7074 TIAM1 T-cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:11805] P T Yes 10659 CELF2 CUGBP, Elav-like family member 2 [Source:HGNC Symbol;Acc:2550] P T 9766 KIAA0247 KIAA0247 [Source:HGNC Symbol;Acc:19956] zzz999 8031 NCOA4 nuclear receptor coactivator 4 [Source:HGNC Symbol;Acc:7671] zzz999 Yes 3628 INPP1 inositol polyphosphate-1-phosphatase [Source:HGNC Symbol;Acc:6071] zzz999 Yes 135644 TRIM40 tripartite motif containing 40 [Source:HGNC Symbol;Acc:18736] zzz999 2746 GLUD1 glutamate dehydrogenase 1 [Source:HGNC Symbol;Acc:4335] zzz999 387 RHOA ras homolog gene family, member A [Source:HGNC Symbol;Acc:667] T Yes 9896 FIG4 FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae) [Source:HGNC Symbol;Acc:16873] zzz999 9792 SERTAD2 SERTA domain containing 2 [Source:HGNC Symbol;Acc:30784] P T 55233 MOBKL1B MOB1, Mps One Binder kinase activator-like 1B (yeast) [Source:HGNC Symbol;Acc:16015] zzz999 Yes 23191 CYFIP1 cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:13759] zzz999 3133 HLA-E major histocompatibility complex, class I, E [Source:HGNC Symbol;Acc:4962] zzz999 Yes 3433 IFIT2 interferon-induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:5409] T Yes 2180 ACSL1 acyl-CoA synthetase long-chain family member 1 [Source:HGNC Symbol;Acc:3569] T 3423 IDS iduronate 2-sulfatase [Source:HGNC Symbol;Acc:5389] T 1997 ELF1 E74-like factor 1 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3316] zzz999 Yes 9724 UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast) [Source:HGNC Symbol;Acc:20321] zzz999 23063 WAPAL wings apart-like homolog (Drosophila) [Source:HGNC Symbol;Acc:23293] P T 8439 NSMAF neutral sphingomyelinase (N-SMase) activation associated factor [Source:HGNC Symbol;Acc:8017] zzz999 Yes 4900 NRGN neurogranin (protein kinase C substrate, RC3) [Source:HGNC Symbol;Acc:8000] zzz999 Yes 196 AHR aryl hydrocarbon receptor [Source:HGNC Symbol;Acc:348] T 4205 MEF2A myocyte enhancer factor 2A [Source:HGNC Symbol;Acc:6993] T Yes 7580 ZNF32 zinc finger protein 32 [Source:HGNC Symbol;Acc:13095] zzz999 526 ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 [Source:HGNC Symbol;Acc:854] zzz999 Yes 1622 DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:HGNC Symbol;Acc:2690] T 7035 TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) [Source:HGNC Symbol;Acc:11760] T 1130 LYST lysosomal trafficking regulator [Source:HGNC Symbol;Acc:1968] T 4780 NFE2L2 nuclear factor (erythroid-derived 2)-like 2 [Source:HGNC Symbol;Acc:7782] P T Yes 10318 TNIP1 TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:16903] zzz999 2735 GLI1 GLI family zinc finger 1 [Source:HGNC Symbol;Acc:4317] zzz999 Yes 4615 MYD88 myeloid differentiation primary response gene (88) [Source:HGNC Symbol;Acc:7562] T Yes 8826 IQGAP1 IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:6110] zzz999 Yes 5527 PPP2R5C protein phosphatase 2, regulatory subunit B', gamma [Source:HGNC Symbol;Acc:9311] P Yes 900 CCNG1 cyclin G1 [Source:HGNC Symbol;Acc:1592] P T 7695 ZNF136 zinc finger protein 136 [Source:HGNC Symbol;Acc:12920] zzz999 2107 ETF1 eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:3477] P T 2581 GALC galactosylceramidase [Source:HGNC Symbol;Acc:4115] T 529 ATP6V1E1 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 [Source:HGNC Symbol;Acc:857] zzz999 Yes 7405 UVRAG UV radiation resistance associated gene [Source:HGNC Symbol;Acc:12640] zzz999 2060 EPS15 epidermal growth factor receptor pathway substrate 15 [Source:HGNC Symbol;Acc:3419] P T Yes 3459 IFNGR1 interferon gamma receptor 1 [Source:HGNC Symbol;Acc:5439] zzz999 Yes 830 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 [Source:HGNC Symbol;Acc:1490] zzz999 5906 RAP1A RAP1A, member of RAS oncogene family [Source:HGNC Symbol;Acc:9855] T Yes

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